26.9 Running PEcAn code for remotely

You do not need to download PEcAn fully on your remote machine. You can compile and install the model specific code pieces of PEcAn on the cluster easily without having to install the full code base of PEcAn (and all OS dependencies). Use the git clone command to:

devtools::install_github("pecanproject/pecan", subdir = 'base/utils')

Next we need to install the model specific pieces, this is done almost the same (example for ED2):

devtools::install_github("pecanproject/pecan", subdir = 'models/ed')

This should install dependencies required.

  • The following are some notes on how to install the model specifics on different HPC clusters*