2 Main Topics
This book is organized around these main topics:
Basic User Guide - Explains a simple setup of PEcAn and how to execute a basic run
Advanced User Guide- Web - Explains the advanced features offered on our web interface
Advanced User Guide - Cmd Line - Explains more advanced customization of PEcAn that can be run from the command line.
User Appendix - Supplementary materials for the user section.
PEcAn Workflow - High Level explanation of the PEcAn workflow.
Development Guide - Explains what you need to know in order to contibute code to PEcAn.
Appendix - Supplementary materials for the developer section.
2.0.1 Using PEcAn
We have developed a number of demos and vignettes to guide your use of PEcAn’s many capabilities:
Type | Title | Web Link | Source Rmd |
---|---|---|---|
Demo | Basic Run | html | Rmd |
Demo | Uncertainty Analysis | html | Rmd |
Demo | Output Analysis | html | Rmd |
Demo | MCMC | html | Rmd |
Demo | Parameter Assimilation | html | Rmd |
Demo | State Assimilation | html | Rmd |
Demo | Sensitivity | html | Rmd |
Vignette | Allometries | html | Rmd |
Vignette | MCMC | html | Rmd |
Vignette | Meteorological Data | html | Rmd |
Vignette | Meta-Analysis | html | Rmd |
Vignette | Photosynthetic Response Curves | html | Rmd |
Vignette | Priors | html | Rmd |
Vignette | Leaf Spectra:PROSPECT inversion | html | Rmd |