Reads output of sensitivity analysis runs
Usage
read.sa.output(
traits,
quantiles,
pecandir,
outdir,
pft.name = "",
start.year,
end.year,
variable,
sa.run.ids = NULL,
per.pft = FALSE
)Arguments
- traits
model parameters included in the sensitivity analysis
- quantiles
quantiles selected for sensitivity analysis
- pecandir
specifies where pecan writes its configuration files
- outdir
directory with model output to use in sensitivity analysis
- pft.name
name of PFT used in sensitivity analysis (Optional)
- start.year
first year to include in sensitivity analysis
- end.year
last year to include in sensitivity analysis
- variable
variables to be read from model output
- sa.run.ids
list of run ids to read. If NULL, will look in `pecandir` for a file named `samples.Rdata` and read from that
- per.pft
flag to determine whether we want SA on pft-specific variables