Package index • PEcAn.remote

All functions

check_model_run(): Check if model run was successful

fqdn(): Returns the fully qualified hostname.

is.localhost(): Check if local host

kill.tunnel(): Kill tunnel to remote machine

merge_job_files(): Merge multiple job.sh files into one larger file.

open_tunnel(): Open an SSH tunnel, prompting for passwords as needed

qsub_get_jobid(): Get Job ID from qsub output

qsub_parallel(): qsub_parallel

qsub_run_finished(): Check if qsub run finished

rabbitmq_create_queue(): Create a queue in RabbitMQ.

rabbitmq_get_message(): Get message from RabbitMQ.

rabbitmq_parse_uri(): parse the RabbiMQ URI.

rabbitmq_post_message(): Post message to RabbitMQ.

rabbitmq_send_message(): Send a message to RabbitMQ rest API.

remote.copy.from(): Copy file from remote to local

remote.copy.to(): Copy file/dir to remote server from local server

remote.execute.R(): Execute command remotely

remote.execute.cmd(): Execute command remotely

setup_modellauncher(): Setup model launcher script and job list

start_qsub(): Start qsub runs

start_rabbitmq(): Start model execution using rabbitmq

start_serial(): Start model execution in serial mode

test_remote(): Test remote execution