Hierarchical MCMC
Usage
hier.mcmc(
settings,
gp.stack,
nstack = NULL,
nmcmc,
rng_orig,
jmp0,
mu_site_init,
nparam,
nsites,
llik.fn,
prior.fn.all,
prior.ind.all
)Arguments
- settings
a pecan settings list
- gp.stack
list of GPs
- nstack
list of number of observations, currently not used
- nmcmc
number of MCMC iterations
- rng_orig
range of knots
- jmp0
initial jump vars
- mu_site_init
initial parameter values per site
- nparam
number of parameters
- nsites
number of sites
- llik.fn
list of likelihood functions
- prior.fn.all
list of prior functions
- prior.ind.all
indices of targeted parameters