get_veg_module.RdLoad/extract + match species module
get_veg_module(input_veg, outfolder, start_date, end_date, dbparms, new_site, host, machine_host, overwrite)
| input_veg | list, this is a sublist of settings$run$inputs that has info about source, id, metadata of the requested IC file |
|---|---|
| outfolder | path to where the processed files will be written |
| start_date | date in "YYYY-MM-DD" format, in case of source==FIA it's the settings$run$start.date, otherwise start_date of the IC file in DB |
| end_date | date in "YYYY-MM-DD" format, in case of source==FIA it's the settings$run$end.date, otherwise end_date of the IC file in DB |
| dbparms | list, settings$database info reqired for opening a connection to DB |
| new_site | data frame, id/lat/lon/name info about the site |
| host | list, host info as in settings$host, host$name forced to be "localhost" upstream |
| machine_host | local machine hostname, e.g. "pecan2.bu.edu" |
| overwrite | logical flag for convert.input |