All functions
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Clean_Tucson()
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Clean_Tucson |
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InventoryGrowthFusion()
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InventoryGrowthFusion |
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InventoryGrowthFusionDiagnostics()
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InventoryGrowthFusionDiagnostics |
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Read_Tucson()
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Read_Tucson |
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buildJAGSdata_InventoryRings()
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Format ring & plot data for JAGA |
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cohort2pool()
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cohort2pool function
Calculates total biomass using veg cohort file. |
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dataone_download()
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DataONE download |
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download_package_rm()
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download_packages |
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ens_veg_module()
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Sampling/ensemble module |
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extract.stringCode()
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extract.string.code |
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extract_FIA()
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extract_FIA |
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extract_soil_gssurgo()
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Extract soil data from gssurgo |
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extract_soil_nc()
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Extract soil data |
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extract_veg()
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load_veg |
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fia.to.psscss()
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fia.to.psscss |
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find.land()
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find.land |
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format_identifier()
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format_identifier |
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from.Tag()
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from.Tag |
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from.TreeCode()
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from.TreeCode |
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gSSURGO.Query()
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This function queries the gSSURGO database for a series of map unit keys |
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get.attributes()
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Retrieve attribute information from a vector or raster layer |
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get.soil()
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get.soil |
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get_resource_map()
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get_resource_map |
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get_veg_module()
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Load/extract + match species module |
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ic_process()
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ic_process |
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id_resolveable()
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id_resolveable |
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load_veg()
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load_veg |
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matchInventoryRings()
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matchInventoryRings |
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match_pft()
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Match model PFTs |
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match_species_id()
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Match BETY species ID. |
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mpot2smoist()
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Convert a matric potential to a soil moisture |
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parse.MatrixNames()
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parse.MatrixNames |
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partition_roots()
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partition_roots |
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plot2AGB()
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plot2AGB |
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pool_ic_list2netcdf()
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pool_ic_list2netcdf |
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pool_ic_netcdf2list()
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pool_ic_netcdf2list |
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prepare_pools()
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prepare_pools |
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put_veg_module()
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Match species to PFTs + veg2model module |
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sample_ic()
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sample_ic |
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sclass()
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This function determines the soil class number based on the fraction of sand, clay, and silt |
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shp2kml()
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Convert shapefile to KML |
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soil.units()
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Get standard units for a soil variable |
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soil2netcdf()
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Save soil texture & parameters in PEcAn standard netCDF CF |
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soil_params()
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Estimate soil parameters from texture class or sand/silt/clay |
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soil_process()
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Module for managing soil texture extraction |
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subset(<layer>)
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Function to subset and clip a GIS vector or raster layer by a bounding box
or clip/subset layer (e.g. shapefile/KML) |
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to.Tag()
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to.Tag |
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to.TreeCode()
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to.TreeCode |
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write_ic()
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write_ic |
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write_veg()
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write_veg |