Start qsub runs

Start qsub runs

start_qsub(run, qsub_string, rundir, host, host_rundir, host_outdir,
  stdout_log, stderr_log, job_script, qsub_extra = NULL)

Arguments

run	(numeric) run ID, as an integer
qsub_string	qsub command string, with arguments. Usually from settings$host$qsub
rundir	Local run directory. Usually from settings$rundir
host	Remote host, as a list or character. Usually from settings$host.
host_rundir	Remote host run directory. Usually from settings$host$rundir
host_outdir	Remote host output directory. Usually from settings$host$outdir
stdout_log	Logfile for redirecting stdout.
stderr_log	Logfile for redirecting stderr
job_script	Base name (no path) of script to run. Usually either job.sh or launcher.sh.
qsub_extra	Extra qsub arguments. Usually from settings$host$modellauncher$qsub.extra

Value

Output of qsub command, as a character. This output can be parsed for ascertaining submission success.