All functions
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check_model_run()
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Check if model run was successful |
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fqdn()
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Returns the fully qualified hostname. |
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is.localhost()
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Check if local host |
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kill.tunnel()
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kill.tunnel |
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open_tunnel()
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Open an SSH tunnel, prompting for passwords as needed |
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qsub_get_jobid()
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Get Job ID from qsub output |
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qsub_run_finished()
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Check if qsub run finished |
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remote.copy.from()
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Copy file from remote to local |
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remote.copy.to()
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Copy file/dir to remote server from local server |
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remote.copy.update()
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Copy to remote and update DB |
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remote.execute.R()
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Execute command remotely |
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remote.execute.cmd()
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Execute command remotely |
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setup_modellauncher()
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Setup model launcher script and job list |
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stamp_started() stamp_finished()
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Stamp start and stop times of runs |
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start(<model.runs>)
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Start selected ecosystem model runs within PEcAn workflow |
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start_qsub()
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Start qsub runs |
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start_rabbitmq()
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Start model execution using rabbitmq |
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start_serial()
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Start model execution in serial mode |
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test_remote()
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Test remote execution |