Match species to PFTs + veg2model module
Usage
put_veg_module(
getveg.id,
dbparms,
input_veg,
pfts,
outfolder,
n.ensemble,
dir,
model,
start_date,
end_date,
new_site,
host,
overwrite
)Arguments
- getveg.id
list, input.id and dbfile.id of the IC file in intermediate pecan standard
- dbparms
list, settings$database info reqired for opening a connection to DB
- input_veg
list, this is a sublist of settings$run$inputs that has info about source, id, metadata of the requested IC file
- pfts
list, same as settings$pfts
- outfolder
path to where the processed files will be written
- n.ensemble
integer, ensemble member number
- dir
dir path to dbfiles on local machine
- model
model name, e.g. "ED2"
- start_date
date in "YYYY-MM-DD" format, in case of source==FIA it's the settings$run$start.date, otherwise start_date of the IC file in DB
- end_date
date in "YYYY-MM-DD" format, in case of source==FIA it's the settings$run$end.date, otherwise end_date of the IC file in DB
- new_site
data frame, id/lat/lon/name info about the site
- host
list, host info as in settings$host, host$name forced to be "localhost" upstream
- overwrite
logical flag for convert_input