Reports the currently installed or loaded version(s) of each PEcAn package, as well as the versions expected by the specified release(s) of the PEcAn system.
Usage
pecan_version(version = max(PEcAn.all::pecan_releases$version), exact = FALSE)Value
data frame with columns for package name, expected version(s),
installed version, and Git hash (if known).
If the sessioninfo package is installed, an additional column reports
where each package was installed from: local, github, CRAN, etc.
Details
When exact = FALSE (the default), pecan_version will show all releases
whose names contain version as a substring.
This is mostly so that e.g. "1.4.2" finds the release tag "v1.4.2",
but since all matches are returned it can also be handy for seeing all
patches sharing a minor version number (see examples).
If more than one version of a package is installed, the output from
pecan_version() will contain multiple rows for that package.
This can occur if you have installed different versions to different
locations in .libPaths(), or if you've loaded a new version into your
current session by loading it from its source directory without installing
it to the R library.
If you see multiple rows unexpectedly, try
find.package(<pkgname>, verbose = TRUE) to see where each version was found.
Examples
pecan_version()
#> package v1.10.0 installed source
#> PEcAn.BASGRA 1.8.2 1.8.2 local (/pecan/mod...
#> PEcAn.BIOCRO 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.CABLE 1.7.5 NA NA
#> PEcAn.CLM45 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.DALEC 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.DB 1.8.2 1.8.2.9000 local (/pecan/bas...
#> PEcAn.ED2 1.8.2 1.8.2 local (/pecan/mod...
#> PEcAn.FATES 1.8.1 1.8.1 local (/pecan/mod...
#> PEcAn.GDAY 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.JULES 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.LDNDC 1.0.2 1.0.2 local (/pecan/mod...
#> PEcAn.LINKAGES 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.LPJGUESS 1.9.0 1.9.0 local (/pecan/mod...
#> PEcAn.MA 1.7.5 1.7.5.9000 local (/pecan/mod...
#> PEcAn.MAAT 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.MAESPA 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.ModelName 0.0.1 0.0.1 local (/pecan/mod...
#> PEcAn.PRELES 1.7.5 NA NA
#> PEcAn.RothC <NA> 0.0.0.9000 local (/pecan/mod...
#> PEcAn.SIBCASA 0.0.3 0.0.3 local (/pecan/mod...
#> PEcAn.SIPNET 1.10.0 1.10.0 local (/pecan/mod...
#> PEcAn.STICS 1.8.2 1.8.2 local (/pecan/mod...
#> PEcAn.all 1.10.0 1.10.0 local
#> PEcAn.allometry 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.assim.batch 1.9.1 1.9.1 local (/pecan/mod...
#> PEcAn.benchmark 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.data.atmosphere 1.9.1 1.9.1.9000 local (/pecan/mod...
#> PEcAn.data.land 1.9.0 1.9.0 local (/pecan/mod...
#> PEcAn.data.mining 1.7.5 NA NA
#> PEcAn.data.remote 1.9.1 1.9.1 local (/pecan/mod...
#> PEcAn.dvmdostem 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.emulator 1.8.2 1.8.2 local (/pecan/mod...
#> PEcAn.logger 1.8.4 1.8.4 local (/pecan/bas...
#> PEcAn.photosynthesis 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.priors 1.7.5 1.7.5 local (/pecan/mod...
#> PEcAn.qaqc 1.7.5 1.7.5 local (/pecan/bas...
#> PEcAn.remote 1.9.1 1.9.1 local (/pecan/bas...
#> PEcAn.settings 1.9.1 1.9.1.9000 local (/pecan/bas...
#> PEcAn.uncertainty 1.9.0 1.9.0.9000 local (/pecan/mod...
#> PEcAn.utils 1.8.2 1.8.2 local (/pecan/bas...
#> PEcAn.visualization 1.8.2 1.8.2 local (/pecan/bas...
#> PEcAn.workflow 1.10.0 1.10.0 local (/pecan/bas...
#> PEcAnAssimSequential 1.10.0 1.10.0.9000 local (/pecan/mod...
#> PEcAnRTM 1.9.1 1.9.1 local (/pecan/mod...
pecan_version(c("1.4.0", "1.5.0", "1.6.0"))
#> package v1.4.0 v1.5.0 v1.6.0 installed source
#> PEcAn.BASGRA <NA> <NA> <NA> 1.8.2 local (/pecan/mod...
#> PEcAn.BIOCRO 1.4.0 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.CABLE <NA> <NA> 1.6.0 NA NA
#> PEcAn.CLM45 <NA> 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.DALEC 1.4.0 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.DB 1.4.0 1.5.0 1.6.0 1.8.2.9000 local (/pecan/bas...
#> PEcAn.ED2 1.4.0 1.5.0 1.6.0 1.8.2 local (/pecan/mod...
#> PEcAn.FATES <NA> 1.5.0 1.6.0 1.8.1 local (/pecan/mod...
#> PEcAn.GDAY <NA> 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.JULES <NA> 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.LDNDC <NA> <NA> <NA> 1.0.2 local (/pecan/mod...
#> PEcAn.LINKAGES <NA> 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.LPJGUESS <NA> 1.5.0 1.6.0 1.9.0 local (/pecan/mod...
#> PEcAn.MA 1.4.0 1.5.0 1.6.0 1.7.5.9000 local (/pecan/mod...
#> PEcAn.MAAT <NA> 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.MAESPA <NA> 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.ModelName 1.4.0 1.5.0 1.6.0 0.0.1 local (/pecan/mod...
#> PEcAn.PRELES <NA> 1.5.0 1.6.0 NA NA
#> PEcAn.RothC <NA> <NA> <NA> 0.0.0.9000 local (/pecan/mod...
#> PEcAn.SIBCASA <NA> <NA> <NA> 0.0.3 local (/pecan/mod...
#> PEcAn.SIPNET 1.4.0 1.5.0 1.6.0 1.10.0 local (/pecan/mod...
#> PEcAn.STICS <NA> <NA> <NA> 1.8.2 local (/pecan/mod...
#> PEcAn.all 1.4.0 1.5.0 1.6.0 1.10.0 local
#> PEcAn.allometry 1.4.0 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.assim.batch 1.4.0 1.5.0 1.6.0 1.9.1 local (/pecan/mod...
#> PEcAn.assim.sequential 1.4.0 1.5.0 1.6.0 NA NA
#> PEcAn.benchmark 1.4.0 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.data.atmosphere 1.4.0 1.5.0 1.6.0 1.9.1.9000 local (/pecan/mod...
#> PEcAn.data.hydrology 1.4.0 1.5.0 1.6.0 NA NA
#> PEcAn.data.land 1.4.0 1.5.0 1.6.0 1.9.0 local (/pecan/mod...
#> PEcAn.data.mining 1.4.0 1.5.0 1.6.0 NA NA
#> PEcAn.data.remote 1.4.0 1.5.0 1.6.0 1.9.1 local (/pecan/mod...
#> PEcAn.dvmdostem <NA> <NA> 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.emulator 1.4.0 1.5.0 1.6.0 1.8.2 local (/pecan/mod...
#> PEcAn.logger <NA> <NA> 1.6.0 1.8.4 local (/pecan/bas...
#> PEcAn.photosynthesis 1.4.0 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.priors 1.4.0 1.5.0 1.6.0 1.7.5 local (/pecan/mod...
#> PEcAn.qaqc 1.4.0 1.5.0 1.6.0 1.7.5 local (/pecan/bas...
#> PEcAn.remote <NA> <NA> 1.6.0 1.9.1 local (/pecan/bas...
#> PEcAn.rtm 1.4.0 <NA> <NA> NA NA
#> PEcAn.settings 1.4.0 1.5.0 1.6.0 1.9.1.9000 local (/pecan/bas...
#> PEcAn.uncertainty 1.4.0 1.5.0 1.6.0 1.9.0.9000 local (/pecan/mod...
#> PEcAn.utils 1.4.0 1.5.0 1.6.0 1.8.2 local (/pecan/bas...
#> PEcAn.visualization 1.4.0 1.5.0 1.6.0 1.8.2 local (/pecan/bas...
#> PEcAn.workflow <NA> <NA> 1.6.0 1.10.0 local (/pecan/bas...
#> PEcAnAssimSequential <NA> <NA> <NA> 1.10.0.9000 local (/pecan/mod...
#> PEcAnRTM <NA> 1.5.0 1.6.0 1.9.1 local (/pecan/mod...
# multiple matches are possible when exact = FALSE
pecan_version("v1.3", exact = TRUE)
#> package v1.3 installed source
#> PEcAn 1.2.6 NA NA
#> PEcAn.BASGRA <NA> 1.8.2 local (/pecan/mod...
#> PEcAn.BIOCRO 1.2 1.7.5 local (/pecan/mod...
#> PEcAn.CLM45 <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.DALEC <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.DB 1.2.6 1.8.2.9000 local (/pecan/bas...
#> PEcAn.ED 1.2.6 NA NA
#> PEcAn.ED2 <NA> 1.8.2 local (/pecan/mod...
#> PEcAn.FATES <NA> 1.8.1 local (/pecan/mod...
#> PEcAn.GDAY <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.JULES <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.LDNDC <NA> 1.0.2 local (/pecan/mod...
#> PEcAn.LINKAGES <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.LPJGUESS <NA> 1.9.0 local (/pecan/mod...
#> PEcAn.MA 1.2.6 1.7.5.9000 local (/pecan/mod...
#> PEcAn.MAAT <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.MAESPA <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.ModelName 1.2 0.0.1 local (/pecan/mod...
#> PEcAn.RothC <NA> 0.0.0.9000 local (/pecan/mod...
#> PEcAn.SIBCASA <NA> 0.0.3 local (/pecan/mod...
#> PEcAn.SIPNET 1.2.6 1.10.0 local (/pecan/mod...
#> PEcAn.STICS <NA> 1.8.2 local (/pecan/mod...
#> PEcAn.all 1.2.6 1.10.0 local
#> PEcAn.allometry <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.assim.batch 1.2.6 1.9.1 local (/pecan/mod...
#> PEcAn.assim.sequential 1.2.6 NA NA
#> PEcAn.benchmark <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.data.atmosphere 1.2.6 1.9.1.9000 local (/pecan/mod...
#> PEcAn.data.land 1.2.6 1.9.0 local (/pecan/mod...
#> PEcAn.data.remote <NA> 1.9.1 local (/pecan/mod...
#> PEcAn.dvmdostem <NA> 1.7.5 local (/pecan/mod...
#> PEcAn.emulator 1.0 1.8.2 local (/pecan/mod...
#> PEcAn.logger <NA> 1.8.4 local (/pecan/bas...
#> PEcAn.photosynthesis 1.2.6 1.7.5 local (/pecan/mod...
#> PEcAn.priors 1.2.6 1.7.5 local (/pecan/mod...
#> PEcAn.qaqc 1.0 1.7.5 local (/pecan/bas...
#> PEcAn.remote <NA> 1.9.1 local (/pecan/bas...
#> PEcAn.rtm 1.2.6 NA NA
#> PEcAn.settings <NA> 1.9.1.9000 local (/pecan/bas...
#> PEcAn.uncertainty 1.2.6 1.9.0.9000 local (/pecan/mod...
#> PEcAn.utils 1.2.6 1.8.2 local (/pecan/bas...
#> PEcAn.visualization 1.2.6 1.8.2 local (/pecan/bas...
#> PEcAn.workflow <NA> 1.10.0 local (/pecan/bas...
#> PEcAnAssimSequential <NA> 1.10.0.9000 local (/pecan/mod...
#> PEcAnRTM <NA> 1.9.1 local (/pecan/mod...
pecan_version("v1.3", exact = FALSE)
#> package v1.3 v1.3.2 v1.3.4 v1.3.5 v1.3.6 v1.3.6.1 installed
#> PEcAn 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 NA
#> PEcAn.BASGRA <NA> <NA> <NA> <NA> <NA> <NA> 1.8.2
#> PEcAn.BIOCRO 1.2 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.7.5
#> PEcAn.CLM45 <NA> <NA> <NA> <NA> <NA> <NA> 1.7.5
#> PEcAn.DALEC <NA> <NA> <NA> <NA> <NA> 1.3.7 1.7.5
#> PEcAn.DB 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.8.2.9000
#> PEcAn.ED 1.2.6 <NA> <NA> <NA> <NA> <NA> NA
#> PEcAn.ED2 <NA> 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.8.2
#> PEcAn.FATES <NA> <NA> <NA> <NA> <NA> <NA> 1.8.1
#> PEcAn.GDAY <NA> <NA> <NA> <NA> <NA> <NA> 1.7.5
#> PEcAn.JULES <NA> <NA> <NA> <NA> <NA> <NA> 1.7.5
#> PEcAn.LDNDC <NA> <NA> <NA> <NA> <NA> <NA> 1.0.2
#> PEcAn.LINKAGES <NA> <NA> <NA> <NA> <NA> <NA> 1.7.5
#> PEcAn.LPJGUESS <NA> <NA> <NA> <NA> <NA> <NA> 1.9.0
#> PEcAn.MA 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.7.5.9000
#> PEcAn.MAAT <NA> <NA> <NA> <NA> <NA> <NA> 1.7.5
#> PEcAn.MAESPA <NA> <NA> <NA> <NA> <NA> <NA> 1.7.5
#> PEcAn.ModelName 1.2 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 0.0.1
#> PEcAn.RothC <NA> <NA> <NA> <NA> <NA> <NA> 0.0.0.9000
#> PEcAn.SIBCASA <NA> <NA> <NA> <NA> <NA> <NA> 0.0.3
#> PEcAn.SIPNET 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.10.0
#> PEcAn.STICS <NA> <NA> <NA> <NA> <NA> <NA> 1.8.2
#> PEcAn.all 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.10.0
#> PEcAn.allometry <NA> <NA> 1.3.3 1.3.3 1.3.3 1.3.7 1.7.5
#> PEcAn.assim.batch 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.9.1
#> PEcAn.assim.sequential 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 NA
#> PEcAn.benchmark <NA> <NA> <NA> 1.3.3 1.3.3 1.3.7 1.7.5
#> PEcAn.dalec <NA> <NA> 1.3.1 1.3.1 1.3.1 <NA> NA
#> PEcAn.data.atmosphere 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.9.1.9000
#> PEcAn.data.hydrology <NA> <NA> <NA> <NA> <NA> 1.3.7 NA
#> PEcAn.data.land 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.9.0
#> PEcAn.data.mining <NA> <NA> 1.3.3 1.3.3 1.3.3 1.3.7 NA
#> PEcAn.data.remote <NA> <NA> <NA> <NA> <NA> 1.3.7 1.9.1
#> PEcAn.dvmdostem <NA> <NA> <NA> <NA> <NA> <NA> 1.7.5
#> PEcAn.emulator 1.0 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.8.2
#> PEcAn.logger <NA> <NA> <NA> <NA> <NA> <NA> 1.8.4
#> PEcAn.photosynthesis 1.2.6 1.3.1 1.3.3 1.3.3 1.3.6 1.3.7 1.7.5
#> PEcAn.priors 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.7.5
#> PEcAn.qaqc 1.0 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.7.5
#> PEcAn.remote <NA> <NA> <NA> <NA> <NA> <NA> 1.9.1
#> PEcAn.rtm 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 NA
#> PEcAn.settings <NA> 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.9.1.9000
#> PEcAn.uncertainty 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.9.0.9000
#> PEcAn.utils 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.8.2
#> PEcAn.visualization 1.2.6 1.3.1 1.3.3 1.3.3 1.3.3 1.3.7 1.8.2
#> PEcAn.workflow <NA> <NA> <NA> <NA> <NA> <NA> 1.10.0
#> PEcAnAssimSequential <NA> <NA> <NA> <NA> <NA> <NA> 1.10.0.9000
#> PEcAnRTM <NA> <NA> <NA> <NA> <NA> <NA> 1.9.1
#> source
#> NA
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/bas...
#> NA
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local
#> local (/pecan/mod...
#> local (/pecan/mod...
#> NA
#> local (/pecan/mod...
#> NA
#> local (/pecan/mod...
#> NA
#> local (/pecan/mod...
#> NA
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/bas...
#> local (/pecan/mod...
#> local (/pecan/mod...
#> local (/pecan/bas...
#> local (/pecan/bas...
#> NA
#> local (/pecan/bas...
#> local (/pecan/mod...
#> local (/pecan/bas...
#> local (/pecan/bas...
#> local (/pecan/bas...
#> local (/pecan/mod...
#> local (/pecan/mod...