Thin wrapper around meta_analysis_standalone that also reads/writes files
and registers results in the PEcAn database.
Usage
run.meta.analysis.pft(
pft,
iterations,
random = TRUE,
threshold = 1.2,
dbfiles,
dbcon,
use_ghs = TRUE,
update = FALSE
)Arguments
- pft
(list) PFT list object, as defined in settings. Must include the following:
outdir,name,posteriorid- iterations
(integer) Number of sampler iterations for MCMC analysis
- random
(boolean; default = TRUE) Should random effects be used?
- threshold
Gelman-Rubin convergence diagnostic (MGPRF) default = 1.2 following Bolker 2008 Ecological Models and Data in R
- dbfiles
(character) directory where previous results are found
- dbcon
(DBI connection object) BETY database connection object
- use_ghs
(boolean; default = TRUE) If TRUE, do not exclude greenhouse data
- update
(boolean; default = TRUE) If
TRUE, replace existing posteriors with new ones