check.convergence.Rd
Uses Gelman multivariate Gelman-Rubin diagnostic to check if multiple MCMC chains have converged
check.convergence(jags_out, threshold = 1.1, verbose = TRUE, ...)
jags_out | mcmc.list object (from coda package) containing samples from MCMC chains. |
---|---|
threshold | Gelman-Rubin diagnostic parameter threshold. Default = 1.1 |
verbose | If TRUE, print convergence result. Default = TRUE |
... | Additional arguments to |
List length 3 containing the following: * convergence: Logical. Whether or not convergence was achieved. * diagnostics: Numerical value of Gelman-Rubin diagnostics for each parameter and multivariate diagnostic * error: Logical. Whether or not an error occured in the Gelman-Rubin calculation.