All functions
|
check_model_run()
|
Check if model run was successful |
fqdn()
|
Returns the fully qualified hostname. |
is.localhost()
|
Check if local host |
kill.tunnel()
|
kill.tunnel |
open_tunnel()
|
Open an SSH tunnel, prompting for passwords as needed |
qsub_get_jobid()
|
Get Job ID from qsub output |
qsub_run_finished()
|
Check if qsub run finished |
remote.copy.from()
|
Copy file from remote to local |
remote.copy.to()
|
Copy file/dir to remote server from local server |
remote.copy.update()
|
Copy to remote and update DB |
remote.execute.R()
|
Execute command remotely |
remote.execute.cmd()
|
Execute command remotely |
setup_modellauncher()
|
Setup model launcher script and job list |
stamp_started() stamp_finished()
|
Stamp start and stop times of runs |
start(<model.runs>)
|
Start selected ecosystem model runs within PEcAn workflow |
start_qsub()
|
Start qsub runs |
start_rabbitmq()
|
Start model execution using rabbitmq |
start_serial()
|
Start model execution in serial mode |
test_remote()
|
Test remote execution |